Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ECHDC1Q9NTX5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ECHDC1Q9NTX5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.64■□□□□ 0.58
ECHDC1Q9NTX5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ECHDC1Q9NTX5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 NME2P1-201ENST00000426182 414 ntBASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 AC022137.2-201ENST00000503482 481 ntBASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ECHDC1Q9NTX5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 AC132938.2-201ENST00000579188 680 ntBASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 AL591163.1-201ENST00000641757 987 ntBASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 AP002414.2-201ENST00000591780 3365 ntBASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 AL137783.1-201ENST00000623494 1896 ntBASIC18.63■□□□□ 0.57
ECHDC1Q9NTX5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AJ011931.1-201ENST00000618749 2492 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms