Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AC055717.3-201ENST00000622967 595 ntBASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 AC092865.6-201ENST00000642101 219 ntBASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCDHB16Q9NRJ7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 KRT8P44-201ENST00000441609 1350 ntBASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 POLD2P1-201ENST00000511220 997 ntBASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 AC243562.1-201ENST00000560672 389 ntBASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 AL136982.4-201ENST00000437689 1740 ntBASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCDHB16Q9NRJ7 LINC00552-201ENST00000625151 2579 ntBASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 PEG13-201ENST00000631594 5667 ntBASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
PCDHB16Q9NRJ7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCDHB16Q9NRJ7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms