Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 TMEM261P1-201ENST00000604899 340 ntBASIC13.17□□□□□ -0.3
GCM1Q9NP62 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AC025048.6-201ENST00000634326 1161 ntBASIC13.17□□□□□ -0.3
GCM1Q9NP62 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AC084364.1-201ENST00000551967 1556 ntBASIC13.16□□□□□ -0.3
GCM1Q9NP62 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 RPL13AP25-201ENST00000484130 612 ntBASIC13.16□□□□□ -0.3
GCM1Q9NP62 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AC092552.1-201ENST00000547243 906 ntBASIC13.16□□□□□ -0.3
GCM1Q9NP62 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 AC023824.1-201ENST00000562945 2975 ntBASIC13.16□□□□□ -0.3
GCM1Q9NP62 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GCM1Q9NP62 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GCM1Q9NP62 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 AC087481.3-201ENST00000602886 1894 ntBASIC13.15□□□□□ -0.3
GCM1Q9NP62 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GCM1Q9NP62 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
GCM1Q9NP62 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms