Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC138969.3-201ENST00000546612 1459 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC138932.2-201ENST00000548268 1459 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC126755.4-201ENST00000549796 1459 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AC104457.1-201ENST00000401024 814 ntBASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 TSEN15P1-201ENST00000423257 515 ntBASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AC125807.1-201ENST00000483097 614 ntBASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AC026748.1-201ENST00000624349 3251 ntBASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRTM1Q9HBL6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AL139400.1-201ENST00000366220 510 ntBASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 PMS2P2-201ENST00000425039 1128 ntBASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 DNAJB3-202ENST00000449667 1266 ntBASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRTM1Q9HBL6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms