Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 AL035633.1-201ENST00000406139 838 ntBASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 AC105021.1-202ENST00000570572 669 ntBASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 AC106028.4-201ENST00000614509 607 ntBASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 FO393414.2-201ENST00000405153 598 ntBASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 LINC00628-201ENST00000628516 1289 ntBASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 AC113367.3-201ENST00000508316 1912 ntBASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
AMBRA1Q9C0C7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AMBRA1Q9C0C7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms