Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 AL121723.1-201ENST00000445194 1519 ntBASIC14.19□□□□□ -0.14
TRIM2Q9C040 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM2Q9C040 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM2Q9C040 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC092580.3-201ENST00000430932 139 ntBASIC14.18□□□□□ -0.14
TRIM2Q9C040 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 COX20P2-201ENST00000452636 358 ntBASIC14.18□□□□□ -0.14
TRIM2Q9C040 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 TIMM17BP1-201ENST00000545713 516 ntBASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC025181.2-201ENST00000606994 802 ntBASIC14.18□□□□□ -0.14
TRIM2Q9C040 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC013726.1-201ENST00000563747 2285 ntBASIC14.18□□□□□ -0.14
TRIM2Q9C040 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM2Q9C040 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM2Q9C040 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms