Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 AL359258.3-201ENST00000622910 2331 ntBASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 AC073347.1-201ENST00000421633 2643 ntBASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 REXO1L5P-201ENST00000622260 2098 ntBASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 AL360270.3-201ENST00000609118 1348 ntBASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNB3Q8WWL7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 AC026434.2-201ENST00000506094 1078 ntBASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNB3Q8WWL7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 CYP46A4P-201ENST00000414953 267 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 SPTLC1P5-201ENST00000450718 252 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 UPF3AP2-201ENST00000457924 1132 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 AL162727.3-201ENST00000635661 2787 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 CICP6-201ENST00000457191 2729 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 AP000593.2-201ENST00000542775 1433 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 AC012508.2-201ENST00000567613 1472 ntBASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNB3Q8WWL7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AC022217.1-201ENST00000521069 738 ntBASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AC091812.3-201ENST00000621362 345 ntBASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AC015967.2-201ENST00000624092 234 ntBASIC23.27■■□□□ 1.32
CCNB3Q8WWL7 AC006435.4-201ENST00000625037 234 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms