Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CKAP2Q8WWK9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 PPT1-213ENST00000641319 2388 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 BCAR1-209ENST00000546196 1340 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 KRT18P67-201ENST00000432816 1264 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AF186996.4-201ENST00000467186 377 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC027307.2-201ENST00000591252 911 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC004877.2-201ENST00000623941 599 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC148477.8-201ENST00000624298 468 ntBASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CKAP2Q8WWK9 AC130686.1-201ENST00000622936 2466 ntBASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 AC016397.2-201ENST00000624848 1985 ntBASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 AL645728.2-202ENST00000641679 227 ntBASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CKAP2Q8WWK9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CKAP2Q8WWK9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms