Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 AL390755.1-201ENST00000623716 2027 ntBASIC14.82□□□□□ -0.04
CLHC1Q8NHS4 SBF1P1-201ENST00000444527 5631 ntBASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 Z97205.2-201ENST00000564697 1639 ntBASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AL512356.2-201ENST00000546955 174 ntBASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AL138828.2-201ENST00000615812 383 ntBASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 Z92544.3-201ENST00000624747 417 ntBASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLHC1Q8NHS4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 AL139400.1-201ENST00000366220 510 ntBASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 DNAJB3-202ENST00000449667 1266 ntBASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 TEX28P1-201ENST00000613479 1221 ntBASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 TEX28P2-201ENST00000617764 1221 ntBASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 AL109936.8-201ENST00000641772 604 ntBASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLHC1Q8NHS4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms