Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC148Q8NFR7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC148Q8NFR7 AC093525.8-201ENST00000624099 1342 ntBASIC17.71■□□□□ 0.42
CCDC148Q8NFR7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC148Q8NFR7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 AC012508.2-201ENST00000567613 1472 ntBASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 WASH3P-207ENST00000560956 1394 ntBASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 ENPP7P5-201ENST00000541031 1031 ntBASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC148Q8NFR7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AP002414.2-201ENST00000591780 3365 ntBASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AL645937.2-201ENST00000396808 931 ntBASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AC007787.1-201ENST00000588095 1583 ntBASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC148Q8NFR7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC148Q8NFR7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms