Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 AC024267.1-201ENST00000582320 895 ntBASIC11.53□□□□□ -0.56
NUP35Q8NFH5 AL009183.1-201ENST00000603760 355 ntBASIC11.53□□□□□ -0.56
NUP35Q8NFH5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 AC107918.4-202ENST00000641623 219 ntBASIC11.53□□□□□ -0.56
NUP35Q8NFH5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.53□□□□□ -0.56
NUP35Q8NFH5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NUP35Q8NFH5 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AL031133.1-201ENST00000406807 723 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AL513480.1-201ENST00000451731 511 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 CXCL1P1-201ENST00000502804 216 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AC061975.2-201ENST00000581722 295 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AC097359.3-201ENST00000603982 1210 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AL732292.2-201ENST00000609649 430 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AC116407.4-201ENST00000623319 1061 ntBASIC11.52□□□□□ -0.57
NUP35Q8NFH5 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NUP35Q8NFH5 KRT8P37-201ENST00000451609 1420 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms