Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AGAP7P-201ENST00000582299 2062 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AGAP14-201ENST00000624701 2060 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AC104457.1-201ENST00000401024 814 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 RARRES2P5-201ENST00000564013 466 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AC005498.2-205ENST00000593218 784 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AC011467.4-201ENST00000594891 528 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AL122018.1-201ENST00000446607 2310 ntBASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TTC9CQ8N5M4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TTC9CQ8N5M4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms