Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBE3BQ7Z3V4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBE3BQ7Z3V4 AC012508.2-201ENST00000567613 1472 ntBASIC19.02■□□□□ 0.63
UBE3BQ7Z3V4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.02■□□□□ 0.63
UBE3BQ7Z3V4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.02■□□□□ 0.63
UBE3BQ7Z3V4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBE3BQ7Z3V4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 TMBIM7P-203ENST00000641617 1718 ntBASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 Z93015.1-201ENST00000451718 390 ntBASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 OR10B1P-201ENST00000601666 907 ntBASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 KRT8P44-201ENST00000441609 1350 ntBASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AP000845.1-201ENST00000581677 2131 ntBASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE3BQ7Z3V4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 CLUHP2-201ENST00000426660 1303 ntBASIC19■□□□□ 0.63
UBE3BQ7Z3V4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 HOMER2P2-201ENST00000451621 847 ntBASIC19■□□□□ 0.63
UBE3BQ7Z3V4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 AC091271.1-201ENST00000611877 1162 ntBASIC19■□□□□ 0.63
UBE3BQ7Z3V4 AL603764.1-201ENST00000636452 321 ntBASIC19■□□□□ 0.63
UBE3BQ7Z3V4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE3BQ7Z3V4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE3BQ7Z3V4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms