Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 ACTBP8-201ENST00000403258 1108 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AC099336.1-201ENST00000417053 1171 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 C2orf27AP3-201ENST00000434123 579 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 BNIP3P42-201ENST00000454982 569 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AC004066.1-201ENST00000502488 802 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 KRT90P-201ENST00000549264 1064 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 BNIP3P29-201ENST00000598302 571 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AC244669.2-201ENST00000612320 853 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AC011447.5-201ENST00000616168 564 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AL354718.3-201ENST00000616414 581 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 CR382287.1-201ENST00000623954 586 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 RHOXF1P1-202ENST00000635473 501 ntBASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3CQ6NXT2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AL583810.1-201ENST00000553344 1045 ntBASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AC145423.3-201ENST00000615987 467 ntBASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AL033527.4-201ENST00000641026 673 ntBASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H3F3CQ6NXT2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 AP005117.1-202ENST00000581724 1908 ntBASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 AC007787.1-201ENST00000588095 1583 ntBASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
H3F3CQ6NXT2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms