Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AC027307.2-201ENST00000591252 911 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 AL359183.1-201ENST00000623796 2132 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PPP4R4Q6NUP7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC027601.5-201ENST00000624065 2482 ntBASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AL645939.2-201ENST00000427340 991 ntBASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC243562.1-201ENST00000560672 389 ntBASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC027612.4-201ENST00000605371 583 ntBASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PPP4R4Q6NUP7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 AL627223.1-201ENST00000416693 442 ntBASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 PRYP6-201ENST00000514804 343 ntBASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 MIR4313-201ENST00000580760 101 ntBASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 MIR4321-201ENST00000592276 80 ntBASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PPP4R4Q6NUP7 AC106028.4-201ENST00000614509 607 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms