Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AC009093.2-202ENST00000620513 2079 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 INE2-201ENST00000630399 1874 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AC004899.1-201ENST00000424687 1714 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 GHSR-202ENST00000427970 912 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 TUBB8P8-201ENST00000458717 1058 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AC134698.3-201ENST00000523880 214 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 FGFR3P5-201ENST00000564496 886 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AC138696.2-201ENST00000607376 223 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 AC100757.4-201ENST00000626934 759 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM71Q2Q1W2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 CICP13-201ENST00000422015 2789 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 MIR3907-201ENST00000579424 151 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 RN7SL163P-201ENST00000583100 276 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AL136301.1-201ENST00000615830 422 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC091544.8-201ENST00000619490 361 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC079336.7-201ENST00000623428 1078 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC002472.3-201ENST00000640124 621 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AP003680.1-201ENST00000598970 3660 ntBASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM71Q2Q1W2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM71Q2Q1W2 AC011742.3-201ENST00000439053 820 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms