Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 AC099548.2-209ENST00000480264 625 ntBASIC18.41■□□□□ 0.54
RFX7Q2KHR2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 KRT18P25-201ENST00000508931 1278 ntBASIC18.41■□□□□ 0.54
RFX7Q2KHR2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 LINC01101-201ENST00000622953 1884 ntBASIC18.41■□□□□ 0.54
RFX7Q2KHR2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AC144831.1-201ENST00000573312 2656 ntBASIC18.4■□□□□ 0.54
RFX7Q2KHR2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AC114812.1-204ENST00000449669 728 ntBASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AC010328.2-201ENST00000597698 1111 ntBASIC18.4■□□□□ 0.54
RFX7Q2KHR2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RFX7Q2KHR2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RFX7Q2KHR2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.39■□□□□ 0.54
RFX7Q2KHR2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 EIF3FP3-201ENST00000434851 1086 ntBASIC18.39■□□□□ 0.53
RFX7Q2KHR2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 RN7SL219P-201ENST00000582872 296 ntBASIC18.39■□□□□ 0.53
RFX7Q2KHR2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.39■□□□□ 0.53
RFX7Q2KHR2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms