Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.44□□□□□ -0.1
LAPTM4AQ15012 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 YBX2P1-201ENST00000394192 760 ntBASIC14.43□□□□□ -0.1
LAPTM4AQ15012 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TIMM8BP1-201ENST00000452384 211 ntBASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 RN7SL589P-201ENST00000481268 310 ntBASIC14.43□□□□□ -0.1
LAPTM4AQ15012 IGHV3-62-201ENST00000520057 340 ntBASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 C20orf181-201ENST00000623918 480 ntBASIC14.43□□□□□ -0.1
LAPTM4AQ15012 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 REXO1L2P-201ENST00000425429 2069 ntBASIC14.43□□□□□ -0.1
LAPTM4AQ15012 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LAPTM4AQ15012 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 FAM220BP-201ENST00000377689 816 ntBASIC14.42□□□□□ -0.1
LAPTM4AQ15012 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 AL022342.1-201ENST00000400363 863 ntBASIC14.42□□□□□ -0.1
LAPTM4AQ15012 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
LAPTM4AQ15012 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms