Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 RN7SKP175-201ENST00000408472 289 ntBASIC20.68■□□□□ 0.9
XPCQ01831 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.68■□□□□ 0.9
XPCQ01831 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 VDAC1P1-201ENST00000439229 848 ntBASIC20.68■□□□□ 0.9
XPCQ01831 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
XPCQ01831 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.68■□□□□ 0.9
XPCQ01831 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.68■□□□□ 0.9
XPCQ01831 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.68■□□□□ 0.9
XPCQ01831 AL391005.1-201ENST00000623953 2435 ntBASIC20.68■□□□□ 0.9
XPCQ01831 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 AP000593.2-201ENST00000542775 1433 ntBASIC20.68■□□□□ 0.9
XPCQ01831 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
XPCQ01831 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XPCQ01831 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.68■□□□□ 0.9
XPCQ01831 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.67■□□□□ 0.9
XPCQ01831 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 AL627231.1-201ENST00000394467 1125 ntBASIC20.67■□□□□ 0.9
XPCQ01831 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.67■□□□□ 0.9
XPCQ01831 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.67■□□□□ 0.9
XPCQ01831 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.67■□□□□ 0.9
XPCQ01831 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.67■□□□□ 0.9
XPCQ01831 AC008805.1-201ENST00000590892 364 ntBASIC20.67■□□□□ 0.9
XPCQ01831 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.67■□□□□ 0.9
XPCQ01831 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
XPCQ01831 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
XPCQ01831 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.67■□□□□ 0.9
XPCQ01831 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
XPCQ01831 MBLAC2-202ENST00000514906 1936 ntBASIC20.66■□□□□ 0.9
XPCQ01831 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.66■□□□□ 0.9
XPCQ01831 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.66■□□□□ 0.9
XPCQ01831 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 AC009779.1-201ENST00000551138 283 ntBASIC20.66■□□□□ 0.9
XPCQ01831 DUX4L47-201ENST00000566374 394 ntBASIC20.66■□□□□ 0.9
XPCQ01831 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.66■□□□□ 0.9
XPCQ01831 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 AL132994.2-201ENST00000603120 687 ntBASIC20.66■□□□□ 0.9
XPCQ01831 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.66■□□□□ 0.9
XPCQ01831 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 SHC1P1-201ENST00000425230 1745 ntBASIC20.66■□□□□ 0.9
XPCQ01831 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 AL162727.3-201ENST00000635661 2787 ntBASIC20.66■□□□□ 0.9
XPCQ01831 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
XPCQ01831 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.66■□□□□ 0.9
XPCQ01831 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XPCQ01831 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPCQ01831 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.65■□□□□ 0.9
XPCQ01831 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPCQ01831 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPCQ01831 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.65■□□□□ 0.9
XPCQ01831 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPCQ01831 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.65■□□□□ 0.9
XPCQ01831 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.65■□□□□ 0.9
XPCQ01831 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
XPCQ01831 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.65■□□□□ 0.9
XPCQ01831 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms