Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC018892.3-201ENST00000623986 2499 ntBASIC13.63□□□□□ -0.23
NKX6-1P78426 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 ANKRD19P-201ENST00000338192 862 ntBASIC13.63□□□□□ -0.23
NKX6-1P78426 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 BCYRN1-201ENST00000418539 200 ntBASIC13.63□□□□□ -0.23
NKX6-1P78426 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-1P78426 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-1P78426 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NKX6-1P78426 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-1P78426 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NKX6-1P78426 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX6-1P78426 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NKX6-1P78426 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX6-1P78426 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX6-1P78426 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 PCDHA3-202ENST00000532566 4594 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 AC018665.1-201ENST00000622927 1362 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NKX6-1P78426 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.62□□□□□ -0.23
NKX6-1P78426 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.62□□□□□ -0.23
NKX6-1P78426 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 KLF2P4-201ENST00000451959 1225 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 CTBP2P5-201ENST00000454986 1264 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 RARRES2P5-201ENST00000564013 466 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 MIR6869-201ENST00000619434 62 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms