Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.92■□□□□ 0.46
IRX3P78415 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX3P78415 AC024909.3-201ENST00000611513 2257 ntBASIC17.92■□□□□ 0.46
IRX3P78415 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 AGGF1P2-201ENST00000426656 2106 ntBASIC17.92■□□□□ 0.46
IRX3P78415 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
IRX3P78415 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
IRX3P78415 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 HOMER2P2-201ENST00000451621 847 ntBASIC17.92■□□□□ 0.46
IRX3P78415 AL591846.1-201ENST00000451736 433 ntBASIC17.92■□□□□ 0.46
IRX3P78415 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.92■□□□□ 0.46
IRX3P78415 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX3P78415 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.92■□□□□ 0.46
IRX3P78415 AC005695.3-201ENST00000614522 232 ntBASIC17.92■□□□□ 0.46
IRX3P78415 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX3P78415 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX3P78415 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX3P78415 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 AL137784.3-201ENST00000623858 2288 ntBASIC17.91■□□□□ 0.46
IRX3P78415 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX3P78415 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX3P78415 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
IRX3P78415 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
IRX3P78415 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX3P78415 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 ACTBP8-201ENST00000403258 1108 ntBASIC17.91■□□□□ 0.46
IRX3P78415 KLF2P2-201ENST00000416807 1039 ntBASIC17.91■□□□□ 0.46
IRX3P78415 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX3P78415 CALR4P-201ENST00000431943 946 ntBASIC17.91■□□□□ 0.46
IRX3P78415 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX3P78415 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.91■□□□□ 0.46
IRX3P78415 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.91■□□□□ 0.46
IRX3P78415 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
IRX3P78415 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.91■□□□□ 0.46
IRX3P78415 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX3P78415 EEF1DP1-201ENST00000585891 896 ntBASIC17.91■□□□□ 0.46
IRX3P78415 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
IRX3P78415 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX3P78415 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX3P78415 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
IRX3P78415 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
IRX3P78415 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX3P78415 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX3P78415 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms