Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AL137783.1-201ENST00000623494 1896 ntBASIC16.62■□□□□ 0.25
SNRPFP62306 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.61■□□□□ 0.25
SNRPFP62306 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 BAATP1-201ENST00000412284 1225 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.61■□□□□ 0.25
SNRPFP62306 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 AC012441.1-201ENST00000446669 685 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.61■□□□□ 0.25
SNRPFP62306 AL596325.1-201ENST00000563991 1082 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.61■□□□□ 0.25
SNRPFP62306 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.61■□□□□ 0.25
SNRPFP62306 KRT8P35-201ENST00000483942 1338 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 CU639417.3-201ENST00000624240 1404 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNRPFP62306 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 TNRC18P2-201ENST00000417666 2714 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.61■□□□□ 0.25
SNRPFP62306 AL359258.3-201ENST00000622910 2331 ntBASIC16.61■□□□□ 0.25
SNRPFP62306 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNRPFP62306 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.6■□□□□ 0.25
SNRPFP62306 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNRPFP62306 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.6■□□□□ 0.25
SNRPFP62306 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SNRPFP62306 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.6■□□□□ 0.25
SNRPFP62306 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 AC007389.4-201ENST00000454674 793 ntBASIC16.6■□□□□ 0.25
SNRPFP62306 RN7SL692P-201ENST00000464677 288 ntBASIC16.6■□□□□ 0.25
SNRPFP62306 MIR5189-201ENST00000577370 114 ntBASIC16.6■□□□□ 0.25
SNRPFP62306 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNRPFP62306 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNRPFP62306 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SNRPFP62306 AC015936.2-201ENST00000593177 259 ntBASIC16.6■□□□□ 0.25
SNRPFP62306 AC010319.3-201ENST00000597028 470 ntBASIC16.6■□□□□ 0.25
SNRPFP62306 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 RPSAP52-203ENST00000622976 1023 ntBASIC16.6■□□□□ 0.25
SNRPFP62306 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNRPFP62306 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.6■□□□□ 0.25
SNRPFP62306 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SNRPFP62306 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms