Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.22■□□□□ 0.83
ZC3H6P61129 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.22■□□□□ 0.83
ZC3H6P61129 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
ZC3H6P61129 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZC3H6P61129 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZC3H6P61129 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.21■□□□□ 0.83
ZC3H6P61129 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.21■□□□□ 0.83
ZC3H6P61129 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.21■□□□□ 0.83
ZC3H6P61129 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.21■□□□□ 0.83
ZC3H6P61129 RN7SL8P-201ENST00000461771 266 ntBASIC20.21■□□□□ 0.83
ZC3H6P61129 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.21■□□□□ 0.83
ZC3H6P61129 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 PGAM1P5-201ENST00000548011 764 ntBASIC20.21■□□□□ 0.83
ZC3H6P61129 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC20.21■□□□□ 0.83
ZC3H6P61129 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ZC3H6P61129 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.21■□□□□ 0.83
ZC3H6P61129 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZC3H6P61129 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.21■□□□□ 0.83
ZC3H6P61129 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC20.21■□□□□ 0.83
ZC3H6P61129 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.21■□□□□ 0.83
ZC3H6P61129 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ZC3H6P61129 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.21■□□□□ 0.83
ZC3H6P61129 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZC3H6P61129 AC136759.1-202ENST00000530858 2194 ntBASIC20.21■□□□□ 0.83
ZC3H6P61129 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
ZC3H6P61129 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZC3H6P61129 CICP13-201ENST00000422015 2789 ntBASIC20.2■□□□□ 0.82
ZC3H6P61129 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.2■□□□□ 0.82
ZC3H6P61129 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.2■□□□□ 0.82
ZC3H6P61129 YRDCP1-201ENST00000621419 643 ntBASIC20.2■□□□□ 0.82
ZC3H6P61129 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
ZC3H6P61129 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.2■□□□□ 0.82
ZC3H6P61129 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 AL008718.2-201ENST00000609206 1313 ntBASIC20.2■□□□□ 0.82
ZC3H6P61129 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.2■□□□□ 0.82
ZC3H6P61129 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H6P61129 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZC3H6P61129 CICP11-201ENST00000434745 2827 ntBASIC20.2■□□□□ 0.82
ZC3H6P61129 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.2■□□□□ 0.82
ZC3H6P61129 FAM90A7P-201ENST00000382628 1395 ntBASIC20.2■□□□□ 0.82
ZC3H6P61129 FAM90A23P-201ENST00000400136 1395 ntBASIC20.2■□□□□ 0.82
ZC3H6P61129 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZC3H6P61129 AC010491.1-201ENST00000563101 2797 ntBASIC20.19■□□□□ 0.82
ZC3H6P61129 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZC3H6P61129 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.19■□□□□ 0.82
ZC3H6P61129 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.19■□□□□ 0.82
ZC3H6P61129 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H6P61129 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZC3H6P61129 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.19■□□□□ 0.82
ZC3H6P61129 AC132192.2-201ENST00000596206 1147 ntBASIC20.19■□□□□ 0.82
ZC3H6P61129 WT1-AS_6.1-201ENST00000614919 121 ntBASIC20.19■□□□□ 0.82
ZC3H6P61129 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H6P61129 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H6P61129 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms