Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4BP1P59074 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 SOCS2P1-201ENST00000417727 557 ntBASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AL049840.4-201ENST00000602422 811 ntBASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AL450472.2-201ENST00000603663 1156 ntBASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AL391069.4-201ENST00000609583 481 ntBASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AL022328.1-201ENST00000610050 478 ntBASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4BP1P59074 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 AC067930.6-201ENST00000623257 4947 ntBASIC17.61■□□□□ 0.41
CHMP4BP1P59074 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 INTS4P2-202ENST00000614726 2019 ntBASIC17.61■□□□□ 0.41
CHMP4BP1P59074 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 EEF1DP4-201ENST00000446006 880 ntBASIC17.61■□□□□ 0.41
CHMP4BP1P59074 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHMP4BP1P59074 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms