Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.43□□□□□ -0.58
CMC4P56277 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CMC4P56277 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 TNRC18P3-201ENST00000441896 2691 ntBASIC11.43□□□□□ -0.58
CMC4P56277 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 LRRC59-203ENST00000576448 1531 ntBASIC11.42□□□□□ -0.58
CMC4P56277 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CMC4P56277 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.42□□□□□ -0.58
CMC4P56277 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CMC4P56277 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 TDH-203ENST00000531764 1110 ntBASIC11.42□□□□□ -0.58
CMC4P56277 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 AL022328.1-201ENST00000610050 478 ntBASIC11.42□□□□□ -0.58
CMC4P56277 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CMC4P56277 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
CMC4P56277 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.42□□□□□ -0.58
CMC4P56277 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 SSR4P1-203ENST00000599569 2260 ntBASIC11.42□□□□□ -0.58
CMC4P56277 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CMC4P56277 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
CMC4P56277 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CMC4P56277 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CMC4P56277 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.41□□□□□ -0.58
CMC4P56277 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms