Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 FTH1P14-201ENST00000482930 551 ntBASIC11.25□□□□□ -0.61
APOC4P55056 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 AC023310.1-201ENST00000554836 735 ntBASIC11.25□□□□□ -0.61
APOC4P55056 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.25□□□□□ -0.61
APOC4P55056 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.25□□□□□ -0.61
APOC4P55056 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.25□□□□□ -0.61
APOC4P55056 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 RHOXF1P1-202ENST00000635473 501 ntBASIC11.25□□□□□ -0.61
APOC4P55056 AL603764.1-201ENST00000636452 321 ntBASIC11.25□□□□□ -0.61
APOC4P55056 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
APOC4P55056 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC4P55056 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC4P55056 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC4P55056 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.24□□□□□ -0.61
APOC4P55056 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 YBX1P6-201ENST00000442962 1002 ntBASIC11.24□□□□□ -0.61
APOC4P55056 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 AC106760.1-201ENST00000508690 800 ntBASIC11.24□□□□□ -0.61
APOC4P55056 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.24□□□□□ -0.61
APOC4P55056 AP000812.2-201ENST00000538934 718 ntBASIC11.24□□□□□ -0.61
APOC4P55056 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.24□□□□□ -0.61
APOC4P55056 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 MIR6775-201ENST00000617557 69 ntBASIC11.24□□□□□ -0.61
APOC4P55056 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 C8orf49-201ENST00000525043 1968 ntBASIC11.24□□□□□ -0.61
APOC4P55056 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 AC093525.8-201ENST00000624099 1342 ntBASIC11.24□□□□□ -0.61
APOC4P55056 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 MIR193BHG-211ENST00000641433 5365 ntBASIC11.24□□□□□ -0.61
APOC4P55056 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC4P55056 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms