Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HAUS4P1-201ENST00000406739 1145 ntBASIC15.8■□□□□ 0.12
ATXN3P54252 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.8■□□□□ 0.12
ATXN3P54252 AL355994.2-201ENST00000447882 704 ntBASIC15.8■□□□□ 0.12
ATXN3P54252 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.8■□□□□ 0.12
ATXN3P54252 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.8■□□□□ 0.12
ATXN3P54252 TDH-203ENST00000531764 1110 ntBASIC15.8■□□□□ 0.12
ATXN3P54252 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.8■□□□□ 0.12
ATXN3P54252 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.8■□□□□ 0.12
ATXN3P54252 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.8■□□□□ 0.12
ATXN3P54252 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ATXN3P54252 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.8■□□□□ 0.12
ATXN3P54252 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.8■□□□□ 0.12
ATXN3P54252 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.8■□□□□ 0.12
ATXN3P54252 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATXN3P54252 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.8■□□□□ 0.12
ATXN3P54252 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATXN3P54252 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATXN3P54252 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATXN3P54252 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATXN3P54252 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.79■□□□□ 0.12
ATXN3P54252 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.79■□□□□ 0.12
ATXN3P54252 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 PDIA3P1-201ENST00000471856 1510 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.79■□□□□ 0.12
ATXN3P54252 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.79■□□□□ 0.12
ATXN3P54252 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 RN7SL399P-201ENST00000471648 279 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 USP32P1-208ENST00000506594 1164 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.79■□□□□ 0.12
ATXN3P54252 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.79■□□□□ 0.12
ATXN3P54252 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 AL583810.1-201ENST00000553344 1045 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.79■□□□□ 0.12
ATXN3P54252 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.79■□□□□ 0.12
ATXN3P54252 MIR6869-201ENST00000619434 62 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 GPAA1P2-202ENST00000606848 1787 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
ATXN3P54252 AC136621.1-201ENST00000624017 2304 ntBASIC15.79■□□□□ 0.12
ATXN3P54252 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.79■□□□□ 0.12
ATXN3P54252 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.79■□□□□ 0.12
ATXN3P54252 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATXN3P54252 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ATXN3P54252 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATXN3P54252 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.78■□□□□ 0.12
ATXN3P54252 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATXN3P54252 AC092933.1-201ENST00000393644 945 ntBASIC15.78■□□□□ 0.12
ATXN3P54252 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms