Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ITGA8P53708 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITGA8P53708 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.8■□□□□ 0.12
ITGA8P53708 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 AC104581.4-201ENST00000623126 3052 ntBASIC15.8■□□□□ 0.12
ITGA8P53708 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 AL035456.1-201ENST00000456064 1369 ntBASIC15.8■□□□□ 0.12
ITGA8P53708 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 AL133267.1-201ENST00000398220 340 ntBASIC15.8■□□□□ 0.12
ITGA8P53708 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
ITGA8P53708 DNAJB3-201ENST00000446806 729 ntBASIC15.8■□□□□ 0.12
ITGA8P53708 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 AL079307.3-201ENST00000556114 283 ntBASIC15.8■□□□□ 0.12
ITGA8P53708 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.8■□□□□ 0.12
ITGA8P53708 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
ITGA8P53708 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.8■□□□□ 0.12
ITGA8P53708 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ITGA8P53708 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ITGA8P53708 Z97205.2-201ENST00000564697 1639 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 AC097376.2-205ENST00000610159 5334 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.79■□□□□ 0.12
ITGA8P53708 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.79■□□□□ 0.12
ITGA8P53708 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 AC104457.1-201ENST00000401024 814 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 AC004461.1-201ENST00000412461 403 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.79■□□□□ 0.12
ITGA8P53708 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 AC026150.2-201ENST00000564693 1156 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 MIR3687-2-201ENST00000577708 61 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.79■□□□□ 0.12
ITGA8P53708 MIR3687-1-201ENST00000614492 61 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 AL513210.1-201ENST00000629608 234 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.79■□□□□ 0.12
ITGA8P53708 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.79■□□□□ 0.12
ITGA8P53708 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 AC006504.5-208ENST00000588784 2401 ntBASIC15.79■□□□□ 0.12
ITGA8P53708 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ITGA8P53708 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ITGA8P53708 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.79■□□□□ 0.12
ITGA8P53708 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITGA8P53708 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 HSPA7-201ENST00000445535 1927 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms