Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.13■□□□□ 0.01
LIMK1P53667 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LIMK1P53667 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.13■□□□□ 0.01
LIMK1P53667 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.13■□□□□ 0.01
LIMK1P53667 NUP210P1-202ENST00000504322 710 ntBASIC15.13■□□□□ 0.01
LIMK1P53667 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 AL645939.5-201ENST00000606834 243 ntBASIC15.13■□□□□ 0.01
LIMK1P53667 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 BX539320.1-201ENST00000623759 877 ntBASIC15.13■□□□□ 0.01
LIMK1P53667 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIMK1P53667 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LIMK1P53667 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIMK1P53667 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 AC008132.1-202ENST00000342005 1389 ntBASIC15.12■□□□□ 0.01
LIMK1P53667 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LIMK1P53667 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK1P53667 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LIMK1P53667 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 AL133267.1-201ENST00000398220 340 ntBASIC15.12■□□□□ 0.01
LIMK1P53667 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.12■□□□□ 0.01
LIMK1P53667 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 AC011742.3-201ENST00000439053 820 ntBASIC15.12■□□□□ 0.01
LIMK1P53667 AC234782.1-201ENST00000451950 919 ntBASIC15.12■□□□□ 0.01
LIMK1P53667 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.12■□□□□ 0.01
LIMK1P53667 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK1P53667 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.12■□□□□ 0.01
LIMK1P53667 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK1P53667 AL450472.2-201ENST00000603663 1156 ntBASIC15.12■□□□□ 0.01
LIMK1P53667 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK1P53667 AP000346.4-201ENST00000614827 381 ntBASIC15.12■□□□□ 0.01
LIMK1P53667 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK1P53667 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
LIMK1P53667 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 AP005117.1-202ENST00000581724 1908 ntBASIC15.11■□□□□ 0.01
LIMK1P53667 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK1P53667 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LIMK1P53667 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.11■□□□□ 0.01
LIMK1P53667 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK1P53667 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK1P53667 OR6D1P-203ENST00000641209 4860 ntBASIC15.11■□□□□ 0.01
LIMK1P53667 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK1P53667 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.11■□□□□ 0.01
LIMK1P53667 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LIMK1P53667 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LIMK1P53667 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK1P53667 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK1P53667 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK1P53667 POU5F1P6-201ENST00000466990 990 ntBASIC15.11■□□□□ 0.01
LIMK1P53667 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms