Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 RPS2P32-201ENST00000439199 892 ntBASIC14.34□□□□□ -0.11
EFNA3P52797 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA3P52797 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA3P52797 AL590640.2-201ENST00000457038 527 ntBASIC14.34□□□□□ -0.11
EFNA3P52797 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
EFNA3P52797 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.34□□□□□ -0.11
EFNA3P52797 AC004066.1-201ENST00000502488 802 ntBASIC14.34□□□□□ -0.11
EFNA3P52797 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA3P52797 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 REXO1L4P-201ENST00000605109 1937 ntBASIC14.34□□□□□ -0.11
EFNA3P52797 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.34□□□□□ -0.11
EFNA3P52797 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.34□□□□□ -0.11
EFNA3P52797 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNA3P52797 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EFNA3P52797 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNA3P52797 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNA3P52797 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNA3P52797 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.33□□□□□ -0.11
EFNA3P52797 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNA3P52797 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
EFNA3P52797 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.33□□□□□ -0.11
EFNA3P52797 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNA3P52797 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.33□□□□□ -0.11
EFNA3P52797 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EFNA3P52797 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EFNA3P52797 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EFNA3P52797 MIR600HG-201ENST00000449175 5984 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
EFNA3P52797 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.33□□□□□ -0.12
EFNA3P52797 BOLA2P3-201ENST00000404566 256 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 AL139094.1-201ENST00000405549 1188 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 CNN2P8-201ENST00000421872 913 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 AC026954.1-201ENST00000429771 1293 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 FAM197Y7-201ENST00000432892 766 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.33□□□□□ -0.12
EFNA3P52797 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 KLF2P4-201ENST00000451959 1225 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.33□□□□□ -0.12
EFNA3P52797 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.33□□□□□ -0.12
EFNA3P52797 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.33□□□□□ -0.12
EFNA3P52797 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
EFNA3P52797 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 AL033527.4-201ENST00000641026 673 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.33□□□□□ -0.12
EFNA3P52797 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
EFNA3P52797 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNA3P52797 KRT8P44-201ENST00000441609 1350 ntBASIC14.33□□□□□ -0.12
EFNA3P52797 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNA3P52797 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms