Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AL133215.2-201ENST00000609242 977 ntBASIC14.18□□□□□ -0.14
SLC9A3P48764 MIR3687-1-201ENST00000614492 61 ntBASIC14.18□□□□□ -0.14
SLC9A3P48764 AC009093.7-201ENST00000623853 1223 ntBASIC14.18□□□□□ -0.14
SLC9A3P48764 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SLC9A3P48764 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLC9A3P48764 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC9A3P48764 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SLC9A3P48764 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 GPS2P2-201ENST00000430745 888 ntBASIC14.17□□□□□ -0.14
SLC9A3P48764 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC9A3P48764 SPDYE14P-201ENST00000442619 822 ntBASIC14.17□□□□□ -0.14
SLC9A3P48764 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC9A3P48764 AC093520.2-201ENST00000561830 333 ntBASIC14.17□□□□□ -0.14
SLC9A3P48764 AC026150.2-201ENST00000564693 1156 ntBASIC14.17□□□□□ -0.14
SLC9A3P48764 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 AC084364.1-201ENST00000551967 1556 ntBASIC14.17□□□□□ -0.14
SLC9A3P48764 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC9A3P48764 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC9A3P48764 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC9A3P48764 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.16□□□□□ -0.14
SLC9A3P48764 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC9A3P48764 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 SPDYE7P-202ENST00000420373 878 ntBASIC14.16□□□□□ -0.14
SLC9A3P48764 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC9A3P48764 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC9A3P48764 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms