Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 AC004233.3-201ENST00000607794 1269 ntBASIC13.71□□□□□ -0.21
CSNK1A1P48729 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.71□□□□□ -0.21
CSNK1A1P48729 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CSNK1A1P48729 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.71□□□□□ -0.22
CSNK1A1P48729 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.71□□□□□ -0.22
CSNK1A1P48729 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.71□□□□□ -0.22
CSNK1A1P48729 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CSNK1A1P48729 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CSNK1A1P48729 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
CSNK1A1P48729 WASH3P-207ENST00000560956 1394 ntBASIC13.71□□□□□ -0.22
CSNK1A1P48729 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 AC091951.1-201ENST00000512854 2465 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 AC067750.1-201ENST00000608826 6545 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 BCRP1-201ENST00000444246 691 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 RN7SL399P-201ENST00000471648 279 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 RPL13AP25-201ENST00000484130 612 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 SERBP1P5-201ENST00000510079 1181 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 AC104596.2-201ENST00000512793 793 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 RRP7BP-205ENST00000566851 833 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 AL096865.1-201ENST00000606796 927 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CSNK1A1P48729 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.7□□□□□ -0.22
CSNK1A1P48729 SBF1P1-201ENST00000444527 5631 ntBASIC13.7□□□□□ -0.22
CSNK1A1P48729 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
CSNK1A1P48729 TCAF2P1-201ENST00000291129 2421 ntBASIC13.69□□□□□ -0.22
CSNK1A1P48729 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CSNK1A1P48729 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms