Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 AC098850.1-201ENST00000419919 790 ntBASIC13.89□□□□□ -0.19
APOBEC1P41238 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.89□□□□□ -0.19
APOBEC1P41238 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.89□□□□□ -0.19
APOBEC1P41238 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
APOBEC1P41238 BX539320.1-201ENST00000623759 877 ntBASIC13.89□□□□□ -0.19
APOBEC1P41238 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 KRT8P22-201ENST00000562317 1415 ntBASIC13.89□□□□□ -0.19
APOBEC1P41238 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOBEC1P41238 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOBEC1P41238 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
APOBEC1P41238 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.88□□□□□ -0.19
APOBEC1P41238 AP000845.1-201ENST00000581677 2131 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
APOBEC1P41238 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.88□□□□□ -0.19
APOBEC1P41238 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.88□□□□□ -0.19
APOBEC1P41238 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.88□□□□□ -0.19
APOBEC1P41238 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.88□□□□□ -0.19
APOBEC1P41238 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.88□□□□□ -0.19
APOBEC1P41238 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.88□□□□□ -0.19
APOBEC1P41238 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.88□□□□□ -0.19
APOBEC1P41238 ELK1P1-201ENST00000485699 580 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.88□□□□□ -0.19
APOBEC1P41238 AL359711.2-201ENST00000563105 872 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 AC124283.3-201ENST00000570869 594 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 AC027307.3-201ENST00000594262 1100 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 AC008494.3-201ENST00000606615 944 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
APOBEC1P41238 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
APOBEC1P41238 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.88□□□□□ -0.19
APOBEC1P41238 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOBEC1P41238 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.87□□□□□ -0.19
APOBEC1P41238 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.87□□□□□ -0.19
APOBEC1P41238 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.87□□□□□ -0.19
APOBEC1P41238 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
APOBEC1P41238 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms