Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 AC092135.3-201ENST00000624151 1846 ntBASIC12.72□□□□□ -0.37
SNCAP37840 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.72□□□□□ -0.37
SNCAP37840 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 RARRES2P8-201ENST00000566335 367 ntBASIC12.72□□□□□ -0.37
SNCAP37840 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SNCAP37840 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.72□□□□□ -0.37
SNCAP37840 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SNCAP37840 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SNCAP37840 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.72□□□□□ -0.37
SNCAP37840 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SNCAP37840 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SNCAP37840 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.71□□□□□ -0.37
SNCAP37840 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SNCAP37840 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.71□□□□□ -0.37
SNCAP37840 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.71□□□□□ -0.37
SNCAP37840 AC007967.2-201ENST00000432613 625 ntBASIC12.71□□□□□ -0.37
SNCAP37840 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.71□□□□□ -0.37
SNCAP37840 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SNCAP37840 PDPK2P-202ENST00000562415 1191 ntBASIC12.71□□□□□ -0.37
SNCAP37840 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.71□□□□□ -0.37
SNCAP37840 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.71□□□□□ -0.37
SNCAP37840 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.71□□□□□ -0.37
SNCAP37840 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms