Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.22■□□□□ 0.19
RFC1P35251 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RFC1P35251 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
RFC1P35251 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.22■□□□□ 0.19
RFC1P35251 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
RFC1P35251 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.22■□□□□ 0.19
RFC1P35251 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC1P35251 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFC1P35251 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFC1P35251 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 AC104457.1-201ENST00000401024 814 ntBASIC16.21■□□□□ 0.19
RFC1P35251 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.21■□□□□ 0.19
RFC1P35251 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.21■□□□□ 0.19
RFC1P35251 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RFC1P35251 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.21■□□□□ 0.19
RFC1P35251 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RFC1P35251 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFC1P35251 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.21■□□□□ 0.19
RFC1P35251 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 WASH3P-207ENST00000560956 1394 ntBASIC16.21■□□□□ 0.19
RFC1P35251 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC1P35251 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RFC1P35251 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFC1P35251 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFC1P35251 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFC1P35251 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFC1P35251 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RFC1P35251 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RFC1P35251 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.21■□□□□ 0.18
RFC1P35251 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RFC1P35251 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RFC1P35251 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 AL136379.1-201ENST00000623471 2642 ntBASIC16.2■□□□□ 0.18
RFC1P35251 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 REXO1L2P-201ENST00000425429 2069 ntBASIC16.2■□□□□ 0.18
RFC1P35251 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms