Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.92□□□□□ -0.18
GDF1P27539 KLF2P2-201ENST00000416807 1039 ntBASIC13.92□□□□□ -0.18
GDF1P27539 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.92□□□□□ -0.18
GDF1P27539 AC114812.1-204ENST00000449669 728 ntBASIC13.92□□□□□ -0.18
GDF1P27539 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
GDF1P27539 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.92□□□□□ -0.18
GDF1P27539 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.92□□□□□ -0.18
GDF1P27539 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 AL158070.2-201ENST00000623713 1621 ntBASIC13.92□□□□□ -0.18
GDF1P27539 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GDF1P27539 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.92□□□□□ -0.18
GDF1P27539 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDF1P27539 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.92□□□□□ -0.18
GDF1P27539 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 AC020658.6-201ENST00000623564 1870 ntBASIC13.91□□□□□ -0.18
GDF1P27539 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 ANKRD19P-201ENST00000338192 862 ntBASIC13.91□□□□□ -0.18
GDF1P27539 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 AL645937.2-201ENST00000396808 931 ntBASIC13.91□□□□□ -0.18
GDF1P27539 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.91□□□□□ -0.18
GDF1P27539 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 AC145423.3-201ENST00000615987 467 ntBASIC13.91□□□□□ -0.18
GDF1P27539 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.91□□□□□ -0.18
GDF1P27539 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GDF1P27539 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 AC007950.2-201ENST00000615045 2347 ntBASIC13.91□□□□□ -0.18
GDF1P27539 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GDF1P27539 CICP11-201ENST00000434745 2827 ntBASIC13.91□□□□□ -0.18
GDF1P27539 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GDF1P27539 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.9□□□□□ -0.18
GDF1P27539 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 AC046158.3-201ENST00000624947 2558 ntBASIC13.9□□□□□ -0.18
GDF1P27539 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GDF1P27539 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GDF1P27539 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms