Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VARSP26640 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
VARSP26640 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VARSP26640 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.2■□□□□ 0.02
VARSP26640 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.2■□□□□ 0.02
VARSP26640 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 RN7SL692P-201ENST00000464677 288 ntBASIC15.2■□□□□ 0.02
VARSP26640 RN7SL618P-201ENST00000477850 296 ntBASIC15.2■□□□□ 0.02
VARSP26640 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.2■□□□□ 0.02
VARSP26640 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.2■□□□□ 0.02
VARSP26640 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 AC010336.2-201ENST00000564226 506 ntBASIC15.2■□□□□ 0.02
VARSP26640 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.2■□□□□ 0.02
VARSP26640 AC025048.3-201ENST00000590609 569 ntBASIC15.2■□□□□ 0.02
VARSP26640 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.2■□□□□ 0.02
VARSP26640 AC005702.4-201ENST00000618393 416 ntBASIC15.2■□□□□ 0.02
VARSP26640 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.2■□□□□ 0.02
VARSP26640 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 KRT8P44-201ENST00000441609 1350 ntBASIC15.2■□□□□ 0.02
VARSP26640 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARSP26640 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
VARSP26640 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.2■□□□□ 0.02
VARSP26640 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.19■□□□□ 0.02
VARSP26640 SERBP1P5-201ENST00000510079 1181 ntBASIC15.19■□□□□ 0.02
VARSP26640 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.19■□□□□ 0.02
VARSP26640 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.19■□□□□ 0.02
VARSP26640 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.19■□□□□ 0.02
VARSP26640 AL590560.3-201ENST00000623350 461 ntBASIC15.19■□□□□ 0.02
VARSP26640 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.19■□□□□ 0.02
VARSP26640 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARSP26640 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.19■□□□□ 0.02
VARSP26640 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms