Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 MIR661-201ENST00000384842 89 ntBASIC15.66■□□□□ 0.1
PTPN3P26045 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PTPN3P26045 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 TSPY16P-201ENST00000449843 468 ntBASIC15.66■□□□□ 0.1
PTPN3P26045 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN3P26045 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN3P26045 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.66■□□□□ 0.1
PTPN3P26045 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 BRI3BPP1-201ENST00000594224 787 ntBASIC15.66■□□□□ 0.1
PTPN3P26045 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN3P26045 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN3P26045 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN3P26045 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PTPN3P26045 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN3P26045 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN3P26045 AL353779.1-201ENST00000434793 351 ntBASIC15.65■□□□□ 0.1
PTPN3P26045 BCRP1-201ENST00000444246 691 ntBASIC15.65■□□□□ 0.1
PTPN3P26045 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN3P26045 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN3P26045 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN3P26045 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN3P26045 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN3P26045 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN3P26045 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 AC106881.1-201ENST00000605849 3329 ntBASIC15.65■□□□□ 0.1
PTPN3P26045 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PTPN3P26045 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PTPN3P26045 AL360270.3-201ENST00000609118 1348 ntBASIC15.65■□□□□ 0.1
PTPN3P26045 AC093525.8-201ENST00000624099 1342 ntBASIC15.65■□□□□ 0.1
PTPN3P26045 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN3P26045 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN3P26045 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN3P26045 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.64■□□□□ 0.1
PTPN3P26045 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PTPN3P26045 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.64■□□□□ 0.1
PTPN3P26045 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 AL138799.1-201ENST00000448213 1675 ntBASIC15.64■□□□□ 0.09
PTPN3P26045 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PTPN3P26045 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms