Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 AC236430.1-201ENST00000402231 743 ntBASIC14.43□□□□□ -0.1
CHMP24386 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 HIST3H2BA-201ENST00000436555 524 ntBASIC14.43□□□□□ -0.1
CHMP24386 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP24386 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.43□□□□□ -0.1
CHMP24386 RN7SL204P-201ENST00000582831 262 ntBASIC14.43□□□□□ -0.1
CHMP24386 LINC02560-201ENST00000596379 459 ntBASIC14.43□□□□□ -0.1
CHMP24386 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.43□□□□□ -0.1
CHMP24386 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.43□□□□□ -0.1
CHMP24386 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP24386 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CHMP24386 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP24386 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP24386 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 ZBED1P1-201ENST00000502364 1930 ntBASIC14.43□□□□□ -0.1
CHMP24386 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 PCDHA3-202ENST00000532566 4594 ntBASIC14.42□□□□□ -0.1
CHMP24386 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 AL161772.1-201ENST00000610494 4412 ntBASIC14.42□□□□□ -0.1
CHMP24386 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
CHMP24386 COX20P2-201ENST00000452636 358 ntBASIC14.42□□□□□ -0.1
CHMP24386 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.42□□□□□ -0.1
CHMP24386 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP24386 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP24386 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP24386 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.42□□□□□ -0.1
CHMP24386 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP24386 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP24386 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CHMP24386 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CHMP24386 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP24386 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP24386 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP24386 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP24386 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHMP24386 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms