Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 BCAR1-209ENST00000546196 1340 ntBASIC13.53□□□□□ -0.24
RAB3BP20337 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB3BP20337 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAB3BP20337 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB3BP20337 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.52□□□□□ -0.24
RAB3BP20337 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RAB3BP20337 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
RAB3BP20337 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RAB3BP20337 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB3BP20337 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RAB3BP20337 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 FAM220BP-201ENST00000377689 816 ntBASIC13.52□□□□□ -0.25
RAB3BP20337 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB3BP20337 AC098831.1-202ENST00000438821 336 ntBASIC13.52□□□□□ -0.25
RAB3BP20337 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB3BP20337 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB3BP20337 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 MBLAC2-202ENST00000514906 1936 ntBASIC13.52□□□□□ -0.25
RAB3BP20337 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RAB3BP20337 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB3BP20337 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB3BP20337 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RAB3BP20337 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB3BP20337 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB3BP20337 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB3BP20337 AC015802.1-201ENST00000588104 1449 ntBASIC13.51□□□□□ -0.25
RAB3BP20337 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 AC002056.1-201ENST00000395613 760 ntBASIC13.51□□□□□ -0.25
RAB3BP20337 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms