Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GAPDHP40-201ENST00000505218 1006 ntBASIC12.04□□□□□ -0.48
CD28P10747 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.04□□□□□ -0.48
CD28P10747 AC025279.2-201ENST00000569730 653 ntBASIC12.04□□□□□ -0.48
CD28P10747 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.04□□□□□ -0.48
CD28P10747 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 AC145423.3-201ENST00000615987 467 ntBASIC12.04□□□□□ -0.48
CD28P10747 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.04□□□□□ -0.48
CD28P10747 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 AC132872.4-202ENST00000622924 2756 ntBASIC12.04□□□□□ -0.48
CD28P10747 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
CD28P10747 AC022188.1-201ENST00000620960 1664 ntBASIC12.03□□□□□ -0.48
CD28P10747 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 FAM197Y7-201ENST00000432892 766 ntBASIC12.03□□□□□ -0.48
CD28P10747 RPL13AP20-201ENST00000459725 609 ntBASIC12.03□□□□□ -0.48
CD28P10747 AC108725.1-201ENST00000495472 409 ntBASIC12.03□□□□□ -0.48
CD28P10747 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.03□□□□□ -0.48
CD28P10747 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.03□□□□□ -0.48
CD28P10747 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.03□□□□□ -0.48
CD28P10747 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 KRT8P35-201ENST00000483942 1338 ntBASIC12.03□□□□□ -0.48
CD28P10747 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
CD28P10747 AC138969.2-201ENST00000532739 9932 ntBASIC12.03□□□□□ -0.48
CD28P10747 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CD28P10747 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.03□□□□□ -0.48
CD28P10747 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CD28P10747 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.48
CD28P10747 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
CD28P10747 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CD28P10747 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.02□□□□□ -0.48
CD28P10747 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD28P10747 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.02□□□□□ -0.49
CD28P10747 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD28P10747 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms