Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.15■□□□□ 0.18
RARAP10276 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.15■□□□□ 0.18
RARAP10276 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
RARAP10276 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.15■□□□□ 0.18
RARAP10276 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RARAP10276 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RARAP10276 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RARAP10276 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.14■□□□□ 0.18
RARAP10276 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RARAP10276 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
RARAP10276 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
RARAP10276 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RARAP10276 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RARAP10276 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RARAP10276 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.14■□□□□ 0.17
RARAP10276 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 AC022144.1-201ENST00000602255 1580 ntBASIC16.14■□□□□ 0.17
RARAP10276 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RARAP10276 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 AC068587.6-202ENST00000641839 5619 ntBASIC16.14■□□□□ 0.17
RARAP10276 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
RARAP10276 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RARAP10276 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.14■□□□□ 0.17
RARAP10276 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RARAP10276 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.14■□□□□ 0.17
RARAP10276 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.14■□□□□ 0.17
RARAP10276 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.14■□□□□ 0.17
RARAP10276 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.14■□□□□ 0.17
RARAP10276 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RARAP10276 RFPL4AP1-201ENST00000530883 850 ntBASIC16.14■□□□□ 0.17
RARAP10276 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
RARAP10276 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.14■□□□□ 0.17
RARAP10276 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.14■□□□□ 0.17
RARAP10276 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RARAP10276 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RARAP10276 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.14■□□□□ 0.17
RARAP10276 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RARAP10276 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 AC005840.4-201ENST00000541242 2494 ntBASIC16.13■□□□□ 0.17
RARAP10276 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.13■□□□□ 0.17
RARAP10276 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RARAP10276 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.13■□□□□ 0.17
RARAP10276 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
RARAP10276 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.13■□□□□ 0.17
RARAP10276 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 AC135586.1-201ENST00000539323 574 ntBASIC16.13■□□□□ 0.17
RARAP10276 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 AC005498.2-205ENST00000593218 784 ntBASIC16.13■□□□□ 0.17
RARAP10276 SRD5A3P1-201ENST00000603021 949 ntBASIC16.13■□□□□ 0.17
RARAP10276 AC000095.1-201ENST00000603208 874 ntBASIC16.13■□□□□ 0.17
RARAP10276 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.13■□□□□ 0.17
RARAP10276 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.13■□□□□ 0.17
RARAP10276 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RARAP10276 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms