Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VTNP04004 GHSR-202ENST00000427970 912 ntBASIC16.73■□□□□ 0.27
VTNP04004 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.73■□□□□ 0.27
VTNP04004 AC104306.2-201ENST00000451877 341 ntBASIC16.73■□□□□ 0.27
VTNP04004 RPSAP36-202ENST00000494591 1261 ntBASIC16.73■□□□□ 0.27
VTNP04004 AL391280.1-201ENST00000506969 1062 ntBASIC16.73■□□□□ 0.27
VTNP04004 COX5BP1-201ENST00000507622 393 ntBASIC16.73■□□□□ 0.27
VTNP04004 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.73■□□□□ 0.27
VTNP04004 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 AC005695.3-201ENST00000614522 232 ntBASIC16.73■□□□□ 0.27
VTNP04004 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.73■□□□□ 0.27
VTNP04004 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.73■□□□□ 0.27
VTNP04004 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VTNP04004 AC136621.1-201ENST00000624017 2304 ntBASIC16.73■□□□□ 0.27
VTNP04004 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
VTNP04004 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 AC132872.4-202ENST00000622924 2756 ntBASIC16.72■□□□□ 0.27
VTNP04004 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.72■□□□□ 0.27
VTNP04004 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VTNP04004 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VTNP04004 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
VTNP04004 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.72■□□□□ 0.27
VTNP04004 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.72■□□□□ 0.27
VTNP04004 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 AL591846.1-201ENST00000451736 433 ntBASIC16.72■□□□□ 0.27
VTNP04004 AP003171.2-201ENST00000528208 925 ntBASIC16.72■□□□□ 0.27
VTNP04004 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.72■□□□□ 0.27
VTNP04004 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
VTNP04004 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VTNP04004 DUX4L47-201ENST00000566374 394 ntBASIC16.72■□□□□ 0.27
VTNP04004 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VTNP04004 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VTNP04004 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.72■□□□□ 0.27
VTNP04004 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VTNP04004 AC007950.2-201ENST00000615045 2347 ntBASIC16.71■□□□□ 0.27
VTNP04004 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.71■□□□□ 0.27
VTNP04004 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VTNP04004 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 AC015818.8-201ENST00000587907 1519 ntBASIC16.71■□□□□ 0.27
VTNP04004 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VTNP04004 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.71■□□□□ 0.27
VTNP04004 AL023775.1-201ENST00000454907 1746 ntBASIC16.71■□□□□ 0.27
VTNP04004 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.71■□□□□ 0.27
VTNP04004 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.71■□□□□ 0.27
VTNP04004 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
VTNP04004 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 MIR1247-201ENST00000408206 136 ntBASIC16.71■□□□□ 0.27
VTNP04004 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.71■□□□□ 0.27
VTNP04004 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VTNP04004 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms