Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 MIR648-201ENST00000385046 94 ntBASIC15.2■□□□□ 0.02
PDGFBP01127 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 FAM86KP-201ENST00000509817 987 ntBASIC15.2■□□□□ 0.02
PDGFBP01127 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.2■□□□□ 0.02
PDGFBP01127 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.2■□□□□ 0.02
PDGFBP01127 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.2■□□□□ 0.02
PDGFBP01127 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDGFBP01127 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDGFBP01127 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDGFBP01127 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFBP01127 AC004837.1-201ENST00000446267 564 ntBASIC15.19■□□□□ 0.02
PDGFBP01127 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.19■□□□□ 0.02
PDGFBP01127 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.19■□□□□ 0.02
PDGFBP01127 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.19■□□□□ 0.02
PDGFBP01127 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFBP01127 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFBP01127 MIR3180-2-201ENST00000581748 88 ntBASIC15.19■□□□□ 0.02
PDGFBP01127 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDGFBP01127 AC084781.1-201ENST00000613737 656 ntBASIC15.19■□□□□ 0.02
PDGFBP01127 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.19■□□□□ 0.02
PDGFBP01127 AC092299.1-201ENST00000632679 757 ntBASIC15.19■□□□□ 0.02
PDGFBP01127 Z98259.2-201ENST00000641583 609 ntBASIC15.19■□□□□ 0.02
PDGFBP01127 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.19■□□□□ 0.02
PDGFBP01127 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PDGFBP01127 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PDGFBP01127 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
PDGFBP01127 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFBP01127 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.19■□□□□ 0.02
PDGFBP01127 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 AC011840.2-201ENST00000563063 1520 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PDGFBP01127 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.18■□□□□ 0.02
PDGFBP01127 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 HIST2H2BA-201ENST00000412169 381 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.18■□□□□ 0.02
PDGFBP01127 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDGFBP01127 DDX39AP1-201ENST00000445147 1181 ntBASIC15.18■□□□□ 0.02
PDGFBP01127 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.18■□□□□ 0.02
PDGFBP01127 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms