Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TIMP1P01033 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMP1P01033 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.3■□□□□ 0.2
TIMP1P01033 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.3■□□□□ 0.2
TIMP1P01033 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TIMP1P01033 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMP1P01033 PHBP15-201ENST00000574228 665 ntBASIC16.3■□□□□ 0.2
TIMP1P01033 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.3■□□□□ 0.2
TIMP1P01033 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.3■□□□□ 0.2
TIMP1P01033 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 MIR6858-201ENST00000620733 67 ntBASIC16.3■□□□□ 0.2
TIMP1P01033 AL132780.4-201ENST00000624870 1135 ntBASIC16.3■□□□□ 0.2
TIMP1P01033 AC127024.7-201ENST00000625101 200 ntBASIC16.3■□□□□ 0.2
TIMP1P01033 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TIMP1P01033 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMP1P01033 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMP1P01033 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMP1P01033 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TIMP1P01033 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.29■□□□□ 0.2
TIMP1P01033 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TIMP1P01033 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMP1P01033 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMP1P01033 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.29■□□□□ 0.2
TIMP1P01033 AP000358.1-201ENST00000456260 156 ntBASIC16.29■□□□□ 0.2
TIMP1P01033 AC018463.1-201ENST00000456674 917 ntBASIC16.29■□□□□ 0.2
TIMP1P01033 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.29■□□□□ 0.2
TIMP1P01033 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TIMP1P01033 AL161773.1-201ENST00000624845 863 ntBASIC16.29■□□□□ 0.2
TIMP1P01033 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMP1P01033 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
TIMP1P01033 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMP1P01033 AC112504.1-201ENST00000623415 1841 ntBASIC16.29■□□□□ 0.2
TIMP1P01033 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP1P01033 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TIMP1P01033 AL583805.1-201ENST00000391389 531 ntBASIC16.28■□□□□ 0.2
TIMP1P01033 AL627422.1-201ENST00000434104 580 ntBASIC16.28■□□□□ 0.2
TIMP1P01033 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.28■□□□□ 0.2
TIMP1P01033 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 CHCHD2P9-201ENST00000461726 456 ntBASIC16.28■□□□□ 0.2
TIMP1P01033 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.28■□□□□ 0.2
TIMP1P01033 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TIMP1P01033 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP1P01033 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TIMP1P01033 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms