Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.81■□□□□ 0.12
TOP3BO95985 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.81■□□□□ 0.12
TOP3BO95985 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.81■□□□□ 0.12
TOP3BO95985 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.81■□□□□ 0.12
TOP3BO95985 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.81■□□□□ 0.12
TOP3BO95985 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TOP3BO95985 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TOP3BO95985 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
TOP3BO95985 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.8■□□□□ 0.12
TOP3BO95985 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.8■□□□□ 0.12
TOP3BO95985 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TOP3BO95985 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.8■□□□□ 0.12
TOP3BO95985 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.8■□□□□ 0.12
TOP3BO95985 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.8■□□□□ 0.12
TOP3BO95985 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.8■□□□□ 0.12
TOP3BO95985 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.8■□□□□ 0.12
TOP3BO95985 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 AC114501.2-201ENST00000439631 535 ntBASIC15.8■□□□□ 0.12
TOP3BO95985 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.8■□□□□ 0.12
TOP3BO95985 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TOP3BO95985 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.8■□□□□ 0.12
TOP3BO95985 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.8■□□□□ 0.12
TOP3BO95985 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TOP3BO95985 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.8■□□□□ 0.12
TOP3BO95985 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TOP3BO95985 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOP3BO95985 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.79■□□□□ 0.12
TOP3BO95985 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TOP3BO95985 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.79■□□□□ 0.12
TOP3BO95985 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.79■□□□□ 0.12
TOP3BO95985 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 FAM220BP-201ENST00000377689 816 ntBASIC15.79■□□□□ 0.12
TOP3BO95985 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 AC005229.1-201ENST00000392885 409 ntBASIC15.79■□□□□ 0.12
TOP3BO95985 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.79■□□□□ 0.12
TOP3BO95985 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.79■□□□□ 0.12
TOP3BO95985 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 CTBP2P5-201ENST00000454986 1264 ntBASIC15.79■□□□□ 0.12
TOP3BO95985 AC098859.1-201ENST00000502915 1238 ntBASIC15.79■□□□□ 0.12
TOP3BO95985 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 RHOQP1-201ENST00000555758 579 ntBASIC15.79■□□□□ 0.12
TOP3BO95985 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.79■□□□□ 0.12
TOP3BO95985 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 AC004461.2-201ENST00000629517 803 ntBASIC15.79■□□□□ 0.12
TOP3BO95985 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOP3BO95985 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.79■□□□□ 0.12
TOP3BO95985 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.78■□□□□ 0.12
TOP3BO95985 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.78■□□□□ 0.12
TOP3BO95985 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TOP3BO95985 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms