Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR3619-201ENST00000579667 83 ntBASIC12.95□□□□□ -0.34
ABCA1O95477 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.95□□□□□ -0.34
ABCA1O95477 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.95□□□□□ -0.34
ABCA1O95477 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ABCA1O95477 AC007326.2-201ENST00000624224 7579 ntBASIC12.95□□□□□ -0.34
ABCA1O95477 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ABCA1O95477 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ABCA1O95477 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.94□□□□□ -0.34
ABCA1O95477 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.94□□□□□ -0.34
ABCA1O95477 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
ABCA1O95477 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ABCA1O95477 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.94□□□□□ -0.34
ABCA1O95477 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.94□□□□□ -0.34
ABCA1O95477 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ABCA1O95477 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.93□□□□□ -0.34
ABCA1O95477 FXNP2-201ENST00000411625 547 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.93□□□□□ -0.34
ABCA1O95477 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 AC079328.1-201ENST00000560358 952 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.93□□□□□ -0.34
ABCA1O95477 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.93□□□□□ -0.34
ABCA1O95477 AC093813.1-201ENST00000605066 256 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.93□□□□□ -0.34
ABCA1O95477 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ABCA1O95477 REXO1L1P-202ENST00000608646 1974 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 AC007950.2-201ENST00000615045 2347 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 LINC01144-201ENST00000626198 1710 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.93□□□□□ -0.34
ABCA1O95477 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.93□□□□□ -0.34
ABCA1O95477 AC074338.1-201ENST00000416825 156 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.93□□□□□ -0.34
ABCA1O95477 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.93□□□□□ -0.34
ABCA1O95477 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.93□□□□□ -0.34
ABCA1O95477 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ABCA1O95477 NDUFV2P1-201ENST00000596415 907 ntBASIC12.93□□□□□ -0.34
ABCA1O95477 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.93□□□□□ -0.34
ABCA1O95477 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ABCA1O95477 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms