Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SPDYE22P-201ENST00000582158 798 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.15□□□□□ -0.14
NKX2-2O95096 AC133539.2-201ENST00000604757 467 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 AC008494.3-201ENST00000606615 944 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-2O95096 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
NKX2-2O95096 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 AP002414.2-201ENST00000591780 3365 ntBASIC14.15□□□□□ -0.14
NKX2-2O95096 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX2-2O95096 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.15□□□□□ -0.14
NKX2-2O95096 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX2-2O95096 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
NKX2-2O95096 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX2-2O95096 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NKX2-2O95096 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX2-2O95096 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-2O95096 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-2O95096 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-2O95096 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-2O95096 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NKX2-2O95096 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NKX2-2O95096 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX2-2O95096 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX2-2O95096 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NKX2-2O95096 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX2-2O95096 ENPP7P5-201ENST00000541031 1031 ntBASIC14.14□□□□□ -0.15
NKX2-2O95096 TP53TG3HP-202ENST00000569755 579 ntBASIC14.14□□□□□ -0.15
NKX2-2O95096 CTBP2P3-201ENST00000585629 1255 ntBASIC14.14□□□□□ -0.15
NKX2-2O95096 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-2O95096 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX2-2O95096 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NKX2-2O95096 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-2O95096 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX2-2O95096 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 CICP23-201ENST00000605013 2741 ntBASIC14.14□□□□□ -0.15
NKX2-2O95096 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.14□□□□□ -0.15
NKX2-2O95096 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX2-2O95096 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 REXO1L5P-201ENST00000622260 2098 ntBASIC14.14□□□□□ -0.15
NKX2-2O95096 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NKX2-2O95096 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-2O95096 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-2O95096 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-2O95096 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NKX2-2O95096 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NKX2-2O95096 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
NKX2-2O95096 AL139094.1-201ENST00000405549 1188 ntBASIC14.13□□□□□ -0.15
NKX2-2O95096 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 AP001582.1-201ENST00000525856 295 ntBASIC14.13□□□□□ -0.15
NKX2-2O95096 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.13□□□□□ -0.15
NKX2-2O95096 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX2-2O95096 AC023824.1-201ENST00000562945 2975 ntBASIC14.13□□□□□ -0.15
NKX2-2O95096 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NKX2-2O95096 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
NKX2-2O95096 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-2O95096 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms