Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.69□□□□□ -0.22
PFDN1O60925 FAM90A11P-201ENST00000518378 2218 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 KRT8P22-201ENST00000562317 1415 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 AC005622.1-201ENST00000636801 1703 ntBASIC13.69□□□□□ -0.22
PFDN1O60925 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.69□□□□□ -0.22
PFDN1O60925 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PFDN1O60925 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PFDN1O60925 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PFDN1O60925 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 AC010336.1-201ENST00000539278 4739 ntBASIC13.68□□□□□ -0.22
PFDN1O60925 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.68□□□□□ -0.22
PFDN1O60925 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.68□□□□□ -0.22
PFDN1O60925 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PFDN1O60925 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.68□□□□□ -0.22
PFDN1O60925 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 AC027369.3-201ENST00000530465 3707 ntBASIC13.68□□□□□ -0.22
PFDN1O60925 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.68□□□□□ -0.22
PFDN1O60925 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PFDN1O60925 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 AC127383.1-201ENST00000444697 1800 ntBASIC13.67□□□□□ -0.22
PFDN1O60925 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.67□□□□□ -0.22
PFDN1O60925 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PFDN1O60925 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.67□□□□□ -0.22
PFDN1O60925 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms