Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SLC28A2O43868 AC004987.2-201ENST00000395959 1148 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 SLC25A24P2-201ENST00000415059 510 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 AC099336.1-201ENST00000417053 1171 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 GPAA1P2-201ENST00000417923 928 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC28A2O43868 BANF1P1-201ENST00000553684 263 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC28A2O43868 AC233724.13-201ENST00000598383 410 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC28A2O43868 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC28A2O43868 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC28A2O43868 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.89□□□□□ -0.03
SLC28A2O43868 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC28A2O43868 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC28A2O43868 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SLC28A2O43868 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 AC105250.1-201ENST00000509378 2057 ntBASIC14.88□□□□□ -0.03
SLC28A2O43868 AC023157.3-201ENST00000619086 2088 ntBASIC14.88□□□□□ -0.03
SLC28A2O43868 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SLC28A2O43868 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC28A2O43868 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.88□□□□□ -0.03
SLC28A2O43868 AC004461.2-201ENST00000629517 803 ntBASIC14.88□□□□□ -0.03
SLC28A2O43868 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC28A2O43868 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.88□□□□□ -0.03
SLC28A2O43868 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SLC28A2O43868 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 AC090616.6-203ENST00000579186 1945 ntBASIC14.88□□□□□ -0.03
SLC28A2O43868 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC28A2O43868 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC28A2O43868 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC28A2O43868 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A2O43868 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A2O43868 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC28A2O43868 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC28A2O43868 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC28A2O43868 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC28A2O43868 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SLC28A2O43868 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC28A2O43868 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC28A2O43868 MIR8072-201ENST00000614241 80 ntBASIC14.87□□□□□ -0.03
SLC28A2O43868 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC28A2O43868 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms